Information for 18-GTAGGTATTATR (Motif 25)

A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A
Reverse Opposite:
G A C T C G T A A G C T C G T A C G T A A C G T C T G A A G T C G T A C C G A T C G T A A G T C
p-value:1e-4
log p-value:-1.136e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.1 +/- 58.5bp
Average Position of motif in Background96.7 +/- 42.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTAGGTATTATR-----
--CCGTATTATAAACAA
 A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTAGGTATTATR
--NGGGATTA--
 A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTAGGTATTATR------
--NCGTATTATAATCNTA
 A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTAGGTATTATR----
AGAGGGGATTAATTTAT
 A C G T A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTAGGTATTATR
--NNGGATTAGN
 A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A
A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTAGGTATTATR
---GGGATTAA-
 A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A
A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTAGGTATTATR----
TGTAGGGATTAATTGTC
 A C G T A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTAGGTATTATR
---GGGATTANN
 A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTAGGTATTATR---
TNNNNGGTGTCATNTNT
 A C G T A C G T A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTAGGTATTATR
--AGGTGTGA--
 A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T