Information for 1-TAAATTATCA (Motif 3)

C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A
Reverse Opposite:
A C G T A C T G T G C A G A C T C G T A C G T A C A G T C G A T C G A T G C T A
p-value:1e-12
log p-value:-2.970e+01
Information Content per bp:1.833
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif7.93%
Number of Background Sequences with motif1715.7
Percentage of Background Sequences with motif3.54%
Average Position of motif in Targets96.0 +/- 55.2bp
Average Position of motif in Background98.8 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TAAATTATCA--
NNCTNAATTATGANN
 A C G T A C G T A C G T C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Dlx1/MA0879.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TAAATTATCA
CCTAATTATC-
 A C G T C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAAATTATCA-----
NNTAATTATAATNANN
 A C G T C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAAATTATCA-----
TATAATTATAATATTC
 A C G T C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0064.1_Sox14_1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAAATTATCA-----
GCTAATTATAATTATC
 A C G T C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TAAATTATCA----
AAAATTGTTATGAA
 C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

HESX1/MA0894.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAAATTATCA
NCCAATTANC-
 A C G T C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A
C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TAAATTATCA----
TAATTAATTAATAATTA
 A C G T A C G T A C G T C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

POU3F3/MA0788.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TAAATTATCA----
-AAATTAGCATAAT
 C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

RAX/MA0718.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAAATTATCA
GCCAATTAAC-
 A C G T C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T