Information for 5-TAAATTCGATGC (Motif 4)

A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G C T G A T C A C T G C G T A C G T A A C G T A C G T A C G T C G T A
p-value:1e-11
log p-value:-2.632e+01
Information Content per bp:1.908
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets116.1 +/- 44.2bp
Average Position of motif in Background87.1 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TAAATTCGATGC
NNNNTGAATTCANNNC
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAAATTCGATGC--
AATCAATTCAATAATT
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAAATTCGATGC-
AAAAAATCGATAAT
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TAAATTCGATGC
NGYCATAAAWCH-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TAAATTCGATGC
CACATTCCAT--
 A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TAAATTCGATGC-
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TAAATTCGATGC-
AAAAAATCGATAAT
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PB0005.1_Bbx_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TAAATTCGATGC----
-TAATTCAATGAAGTG
 A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PH0106.1_Msx1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TAAATTCGATGC-
NNATTAATTAGTNGNN
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C A C G T
C A T G C G T A T G C A G A C T G A C T C G T A C G T A A C G T A C G T C T G A C T A G G A C T C G A T C A T G A G T C T G C A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TAAATTCGATGC
-GCATTCCAGN-
 A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C
A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T