Information for 7-AATTAAACRGAA (Motif 7)

C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
Reverse Opposite:
A G C T C A G T T G A C G A C T C T A G G A C T A C G T C G A T G T C A G T C A G C A T G A C T
p-value:1e-10
log p-value:-2.443e+01
Information Content per bp:1.728
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif5.60%
Number of Background Sequences with motif1125.0
Percentage of Background Sequences with motif2.32%
Average Position of motif in Targets97.7 +/- 53.1bp
Average Position of motif in Background99.1 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AATTAAACRGAA
-ATTAAA-----
 C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AATTAAACRGAA
GGTAATTAAA-----
 A C G T A C G T A C G T C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATTAAACRGAA
TTAATTAA------
 A C G T A C G T C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATTAAACRGAA
GCAATAAAAA----
 A C G T A C G T C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AATTAAACRGAA
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PRRX1/MA0716.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AATTAAACRGAA
CTAATTAA------
 A C G T A C G T C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AATTAAACRGAA
ACTAATTAAA-----
 A C G T A C G T A C G T C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AATTAAACRGAA
NCTAATTAANN----
 A C G T A C G T A C G T C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T A C G T A C G T A C G T A C G T

LMX1A/MA0702.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AATTAAACRGAA
TTAATTAA------
 A C G T A C G T C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
A G C T G A C T C T G A G C T A G C A T C G A T C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

MIXL1/MA0662.1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AATTAAACRGAA
TCTAATTAAC-----
 A C G T A C G T A C G T C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A
C G A T A G T C G A C T T C G A G C T A A G C T A G C T G C T A T C G A T G A C A C G T A C G T A C G T A C G T A C G T