Information for 9-TTGTAATA (Motif 17)

A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A
Reverse Opposite:
G A C T G T C A C A G T A C G T C T G A A G T C G T C A C G T A
p-value:1e-4
log p-value:-9.490e+00
Information Content per bp:1.771
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif16.18%
Number of Background Sequences with motif2961.4
Percentage of Background Sequences with motif6.54%
Average Position of motif in Targets108.7 +/- 55.0bp
Average Position of motif in Background100.5 +/- 58.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TTGTAATA---
NNNTTTNTAATACNG
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----TTGTAATA---
TATAATTATAATATTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TTGTAATA---
TAAGATTATAATACGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TTGTAATA---
GCTAATTATAATTATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TTGTAATA---
TTTAATTATAATTAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTGTAATA----
CAATTGCAAAAATAT
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A A C G T A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTGTAATA----
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A A C G T A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTGTAATA----
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A A C G T A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTGTAATA--
TTGCAACATN
 A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A A C G T A C G T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PB0129.1_Glis2_2/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTGTAATA--
TCTTTANTAATANN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T