Information for 11-GTYTGTBTGT (Motif 19)

A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T
Reverse Opposite:
C G T A T G A C C G T A T A C G C G T A A G T C C G T A C T A G C G T A A T G C
p-value:1e-3
log p-value:-8.390e+00
Information Content per bp:1.730
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif16.91%
Number of Background Sequences with motif3425.2
Percentage of Background Sequences with motif7.56%
Average Position of motif in Targets96.7 +/- 53.8bp
Average Position of motif in Background101.6 +/- 77.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.78
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTYTGTBTGT--
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C G T A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GTYTGTBTGT-
----GTTTGTT
 A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTYTGTBTGT--
GAATGTTTGTTT
 A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T A C G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTYTGTBTGT
CCTTTGTTTT-
 A C G T A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTYTGTBTGT---
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTYTGTBTGT
NNCTTTGTTNN-
 A C G T A C G T A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTYTGTBTGT
VBSYGTCTGG
 A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTYTGTBTGT
--TWGTCTGV
 A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTYTGTBTGT--
---TGTTTATTT
 A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTYTGTBTGT
--CTGTCTGG
 A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G