Information for 2-TTTCCGTGATTT (Motif 2)

A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A G T C C G T A G A T C A C T G A C T G C G T A C G T A C G T A
p-value:1e-24
log p-value:-5.547e+01
Information Content per bp:1.934
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif6.62%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.5 +/- 45.8bp
Average Position of motif in Background77.0 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:TTTCCGTGATTT-
---CNGTGATTTN
 A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTCCGTGATTT
-TGCTGTGATTT
 A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTCCGTGATTT------
-TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTTCCGTGATTT
--GCAGTGATTT
 A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCGTGATTT-
NANTTCATTGAATTA
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTCCGTGATTT-
GGTTCCNNAATTTG
 A C G T A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

Hoxc9/MA0485.1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTTCCGTGATTT------
-----NTGATTTATGGCC
 A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTCCGTGATTT
ATTTTCCATT----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTCCGTGATTT
ATTTTCCATT----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T

PB0075.1_Sp100_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCGTGATTT
ATTTTCCGNNAAAT
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T
G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T