Information for 16-CCCAGCAC (Motif 23)

A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C
Reverse Opposite:
C T A G A C G T A C T G A G T C A C G T A C T G A C T G A C T G
p-value:1e-2
log p-value:-5.944e+00
Information Content per bp:1.941
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif11.03%
Number of Background Sequences with motif2199.1
Percentage of Background Sequences with motif4.86%
Average Position of motif in Targets80.1 +/- 59.2bp
Average Position of motif in Background100.9 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCCAGCAC----
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CCCAGCAC----
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGCAC
TGCCCAGNHW
 A C G T A C G T A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCCAGCAC----
GAGCACAGCAGGACA
 A C G T A C G T A C G T A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCCAGCAC----
CACAGCAGGGGG
 A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCCAGCAC---
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCAC-
DCTCAGCAGG
 A C G T A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCAC------
DCHCAGCAGGRGGCC
 A C G T A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCCAGCAC
CACAGN--
 A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCCAGCAC
--CAGCC-
 A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T