Information for 18-CGTTAYGT (Motif 28)

A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T
Reverse Opposite:
C G T A A G T C C T A G A G C T C G T A C G T A A G T C A T C G
p-value:1e-2
log p-value:-4.933e+00
Information Content per bp:1.780
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif251.8
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets107.7 +/- 55.9bp
Average Position of motif in Background100.6 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEF/MA0843.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGTTAYGT----
NGTTACGTAATN
 A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A

GMEB2/MA0862.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CGTTAYGT--
--TTACGTAA
 A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

DBP/MA0639.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGTTAYGT----
NGTTACGTAATN
 A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T A C G T A C G T A C G T A C G T
A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A

HLF/MA0043.2/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGTTAYGT----
NGTTACGTAANN
 A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T A C G T A C G T A C G T A C G T
C A T G T C A G G C A T C A G T C T G A A G T C T C A G G A C T T G C A C G T A A G C T C T A G

NFIL3/MA0025.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGTTAYGT-----
--TTATGTAACAT
 A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

USF2/MA0526.2/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CGTTAYGT-----
CGGGGTCACGTGGCCC
 A C G T A C G T A C G T A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A T C G C T A G C T A G T C A G G A C T T A G C T C G A A G T C T C A G G A C T A C T G C T A G A G T C A G T C T G A C

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CGTTAYGT--
CCGGTCACGTGA
 A C G T A C G T A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T A C G T A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

Atf1/MA0604.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGTTAYGT-
-ATGACGTA
 A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T A C G T
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

CRE(bZIP)/Promoter/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGTTAYGT---
CGGTGACGTCAC
 A C G T A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T A C G T A C G T A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

Crem/MA0609.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGTTAYGT--
TATGACGTAA
 A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T A C G T A C G T
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A