Information for 4-GAAAAWTKAGAA (Motif 4)

A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T G T A C C G T A C G T A A C G T A C G T A C G T A C G T A G T C
p-value:1e-17
log p-value:-4.066e+01
Information Content per bp:1.892
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets108.8 +/- 53.8bp
Average Position of motif in Background98.8 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAAAAWTKAGAA
GWAAYHTGAKMC
 A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAAAAWTKAGAA
GWAAYHTGABMC
 A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

SIX1/MA1118.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAAAWTKAGAA
GTAACCTGATA-
 A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A A C G T

SIX2/MA1119.1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAAAAWTKAGAA
AACTGAAACCTGATAC
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAWTKAGAA
TGGAAAA-------
 A C G T A C G T A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAAAWTKAGAA--
TGWAAYCTGABACCB
 A C G T A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAAAAWTKAGAA
NATGGAAAAN------
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAAAAWTKAGAA-
-GAAAMTGAAACT
 A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A A C G T
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAAAAWTKAGAA
AATGGAAAAT------
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAAAWTKAGAA-
-GAAAGTGAAAGT
 A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T