Information for 4-ACTTGAAAAC (Motif 7)

G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C
Reverse Opposite:
A C T G A C G T A G C T A C G T C G A T A G T C C G T A T G C A A C T G A C G T
p-value:1e-11
log p-value:-2.737e+01
Information Content per bp:1.858
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif10.29%
Number of Background Sequences with motif317.6
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets106.5 +/- 64.3bp
Average Position of motif in Background93.8 +/- 54.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------ACTTGAAAAC-
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ACTTGAAAAC
CCACTTGAA---
 A C G T A C G T G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ACTTGAAAAC
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACTTGAAAAC
ACCACTTGAA---
 A C G T A C G T A C G T G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACTTGAAAAC
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACTTGAAAAC
TAAGCCACTTGAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACTTGAAAAC---
TACTGGAAAAAAAA
 A C G T G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C A C G T A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTTGAAAAC
ARNTGACA--
 G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------ACTTGAAAAC
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACTTGAAAAC
--TTGACAGG
 G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G