Information for 1-AAGGTGSAARCT (Motif 1)

C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T
Reverse Opposite:
C G T A A C T G A G C T A C G T A C G T A T G C A T G C C G T A A G T C A G T C A C G T A C G T
p-value:1e-20
log p-value:-4.646e+01
Information Content per bp:1.917
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.4 +/- 62.9bp
Average Position of motif in Background139.5 +/- 41.5bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAGGTGSAARCT
DAGGTGTBAA--
 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T
C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGGTGSAARCT
AAGGTGTKAA--
 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGGTGSAARCT
-AGGTGTCA---
 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGGTGSAARCT
AAGGTGTGAA--
 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAGGTGSAARCT
--AATGGAAAAT
 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGGTGSAARCT-
AAGGTGTGAAAAT
 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGGTGSAARCT
AAGGTGTGAAA-
 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGGTGSAARCT
-AGGTGTGA---
 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGGTGSAARCT
-AGGTGTTAAT-
 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGTGSAARCT
-AGGTGTGA---
 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T