Information for 8-TGGTTGATTG (Motif 12)

C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G
Reverse Opposite:
A T G C G T C A G C T A G C A T A G T C G C T A C G T A G T A C G T A C G C T A
p-value:1e-5
log p-value:-1.224e+01
Information Content per bp:1.655
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif16.01%
Number of Background Sequences with motif4899.0
Percentage of Background Sequences with motif10.45%
Average Position of motif in Targets101.1 +/- 51.8bp
Average Position of motif in Background99.4 +/- 56.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:TGGTTGATTG-
---TTGATTGN
 C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G A C G T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TGGTTGATTG-----
NNNNGTTGATTGGGTCG
 A C G T A C G T C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G A C G T A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGGTTGATTG
TTTGATTGATGN
 A C G T A C G T C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGGTTGATTG
TGATTGATGA
 C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGGTTGATTG--
--TTTNATTGCY
 C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGGTTGATTG
TGATKGATGR
 C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGGTTGATTG-
TGATTTATGGC
 C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G A C G T
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGGTTGATTG--
NTNTTGTTGTTTGTN
 A C G T A C G T A C G T C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTGATTG-
ATGATKGATGRC
 A C G T C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

NFYA/MA0060.3/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGGTTGATTG---
--NCTGATTGGNN
 C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T