Information for 11-TTTTGCGT (Motif 24)

A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T
Reverse Opposite:
C G T A G T A C A C T G A G T C C G T A C T G A C G T A C T G A
p-value:1e-2
log p-value:-6.890e+00
Information Content per bp:1.837
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif240.1
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets106.6 +/- 57.2bp
Average Position of motif in Background102.1 +/- 50.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TTTTGCGT----
--TTGCGTGCVA
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

POU5F1/MA1115.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCGT--
NATTTGCATNN
 A C G T A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TTTTGCGT-
---TGCGTG
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTTGCGT-----
TATTGCATCATCC
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGCGT---
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTTGCGT--
TTCATTTGCATAT
 A C G T A C G T A C G T A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

CEBPD/MA0836.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTTGCGT---
-ATTGCGCAAT
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T
A C G T T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTTGCGT-
GATTTGCATA
 A C G T A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T
A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A

CEBPG/MA0838.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTTGCGT---
-ATTGCGCAAT
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T A C G T
A C G T T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTGCGT--
ATTTGCATAT
 A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T A C G T A C G T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T