Information for 4-GAAAATTTAG (Motif 9)

A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.333e+01
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif22.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets119.6 +/- 53.1bp
Average Position of motif in Background82.2 +/- 50.1bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT5/MA0606.1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GAAAATTTAG
NATGGAAAAN----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAATTTAG
NNCNNAACAATTNT-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAAAATTTAG
TGGAAAA-----
 A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GAAAATTTAG
AATGGAAAAT----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAAATTTAG--
GWAAYHTGAKMC
 A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PB0171.1_Sox18_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAAAATTTAG---
NNNNTGAATTCANNNC
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAAAATTTAG
AATGGAAAAT----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAAAATTTAG--
TATCATAATTAAGGA
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAATTTAG--
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Dlx1/MA0879.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAAATTTAG
NNTAATTANN
 A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G
T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G