Homer Known Motif Enrichment Results (A2_minus_A1_input_motif)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 56269, Total Background Sequences = 56665
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer1e-11-2.640e+010.000016892.030.02%16268.628.71%motif file (matrix) svg
2 T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-9-2.079e+010.000012640.022.47%12138.721.42%motif file (matrix) svg
3 C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-8-1.918e+010.000031444.055.89%30987.854.68%motif file (matrix) svg
4 G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer1e-8-1.884e+010.00004932.08.77%4592.48.10%motif file (matrix) svg
5 C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer1e-7-1.802e+010.00008421.014.97%8016.714.15%motif file (matrix) svg
6 C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer1e-7-1.773e+010.00005691.010.11%5344.29.43%motif file (matrix) svg
7 T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer1e-6-1.401e+010.00015467.09.72%5173.09.13%motif file (matrix) svg
8 A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-5-1.379e+010.000119438.034.55%19040.233.60%motif file (matrix) svg
9 C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer1e-5-1.283e+010.000113939.024.77%13573.323.95%motif file (matrix) svg
10 T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer1e-5-1.223e+010.00023023.05.37%2812.34.96%motif file (matrix) svg
11 G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-5-1.214e+010.000211469.020.38%11131.419.64%motif file (matrix) svg
12 G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer1e-5-1.213e+010.00026577.011.69%6291.311.10%motif file (matrix) svg
13 C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer1e-5-1.182e+010.00028714.015.49%8406.614.83%motif file (matrix) svg
14 G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-4-1.083e+010.00063995.07.10%3776.96.67%motif file (matrix) svg
15 T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-4-1.067e+010.00077079.012.58%6811.412.02%motif file (matrix) svg
16 C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer1e-4-9.754e+000.00161097.01.95%982.61.73%motif file (matrix) svg
17 T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer1e-4-9.634e+000.00167947.014.12%7689.813.57%motif file (matrix) svg
18 T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer1e-4-9.458e+000.00199179.016.31%8914.115.73%motif file (matrix) svg
19 T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer1e-4-9.352e+000.00206685.011.88%6446.811.38%motif file (matrix) svg
20 T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-4-9.261e+000.00201663.02.96%1528.42.70%motif file (matrix) svg
21 T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer1e-3-9.206e+000.00207400.013.15%7156.512.63%motif file (matrix) svg
22 G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer1e-3-9.185e+000.00209744.017.32%9481.416.73%motif file (matrix) svg
23 T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-3-9.121e+000.00202055.03.65%1908.63.37%motif file (matrix) svg
24 C A T G A C T G A G C T A T G C C G T A A T G C G T A C G A C T T A C G C T G A A C T G A C T G G C A T A T G C C T G A THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer1e-3-8.923e+000.00243021.05.37%2850.55.03%motif file (matrix) svg
25 C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer1e-3-8.055e+000.005415675.027.86%15423.227.22%motif file (matrix) svg
26 C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer1e-3-7.971e+000.00571631.02.90%1510.62.67%motif file (matrix) svg
27 A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer1e-3-7.832e+000.00636500.011.55%6293.811.11%motif file (matrix) svg
28 C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-3-7.727e+000.00677163.012.73%6952.112.27%motif file (matrix) svg
29 T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer1e-3-7.711e+000.0067343.00.61%287.90.51%motif file (matrix) svg
30 C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer1e-3-7.613e+000.007019416.034.51%19182.433.85%motif file (matrix) svg
31 T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer1e-3-7.566e+000.00715116.09.09%4930.28.70%motif file (matrix) svg
32 C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-3-7.420e+000.00802000.03.55%1874.83.31%motif file (matrix) svg
33 C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer1e-3-7.286e+000.00898534.015.17%8323.814.69%motif file (matrix) svg
34 T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer1e-3-7.249e+000.008921117.037.53%20900.536.88%motif file (matrix) svg
35 T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C YY1(Zf)/Promoter/Homer1e-2-6.861e+000.0128215.00.38%174.60.31%motif file (matrix) svg
36 T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer1e-2-6.843e+000.01281049.01.86%960.41.69%motif file (matrix) svg
37 A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-6.824e+000.01287778.013.82%7583.413.38%motif file (matrix) svg
38 C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer1e-2-6.771e+000.01292757.04.90%2622.34.63%motif file (matrix) svg
39 C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-2-6.539e+000.015927308.048.54%27148.847.91%motif file (matrix) svg
40 G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer1e-2-6.477e+000.016521243.037.76%21053.937.15%motif file (matrix) svg
41 C G A T C T A G T C A G C A G T C G T A A G T C G C T A A C G T G A C T A T G C A G T C G C T A PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer1e-2-6.367e+000.01793217.05.72%3080.75.44%motif file (matrix) svg
42 G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-2-6.278e+000.01917536.013.39%7356.212.98%motif file (matrix) svg
43 G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer1e-2-6.270e+000.01911421.02.53%1325.62.34%motif file (matrix) svg
44 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer1e-2-6.235e+000.01918075.014.35%7893.513.93%motif file (matrix) svg
45 G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer1e-2-5.906e+000.02593409.06.06%3277.45.78%motif file (matrix) svg
46 A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-2-5.728e+000.0303513.00.91%457.80.81%motif file (matrix) svg
47 C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer1e-2-5.655e+000.03192191.03.89%2084.83.68%motif file (matrix) svg
48 C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-2-5.628e+000.03217314.013.00%7152.312.62%motif file (matrix) svg
49 C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer1e-2-5.611e+000.03214330.07.70%4192.77.40%motif file (matrix) svg
50 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-2-5.595e+000.032114237.025.30%14062.524.82%motif file (matrix) svg
51 T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer1e-2-5.544e+000.032815442.027.45%15270.026.95%motif file (matrix) svg
52 C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer1e-2-5.360e+000.03876000.010.66%5853.110.33%motif file (matrix) svg
53 T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-2-5.189e+000.04501157.02.06%1081.21.91%motif file (matrix) svg
54 T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-2-5.096e+000.04851585.02.82%1499.62.65%motif file (matrix) svg
55 T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-2-5.074e+000.04871598.02.84%1512.82.67%motif file (matrix) svg
56 A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer1e-2-5.013e+000.05084420.07.86%4294.77.58%motif file (matrix) svg
57 T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer1e-2-4.762e+000.0642272.00.48%236.30.42%motif file (matrix) svg
58 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-2-4.745e+000.064221441.038.11%21320.037.62%motif file (matrix) svg
59 A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-2-4.734e+000.064210708.019.03%10563.218.64%motif file (matrix) svg
60 A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer1e-2-4.658e+000.067745.00.08%31.00.05%motif file (matrix) svg
61 C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-2-4.640e+000.06787198.012.79%7064.012.47%motif file (matrix) svg