bah RNA-Seq

Zebrafish RNA-Seq

Treatment	Samples
bah	bah1, bah2, bah3
sibling	sib1, sib2, sib3

coldata

##      treatment
## bah1       bah
## bah2       bah
## bah3       bah
## sib1       sib
## sib2       sib
## sib3       sib

Alignment quality

heatmap and PCA

Comparisons

bah vs sib

Differentially expressed genes

	high in bah	high in sib	Total
bah vs sib	518	959	1477

Volcano plot

bah vs sib, padj<0.05, FC>2

Index

Highly expressed in bah

Highly expressed in sib

Regularly expressed

LogFC

LogPadj

KEGG and GO

bah vs sib

[Highly expressed in bah] (https://maayanlab.cloud/FishEnrichr/enrich?dataset=a48a1ec219d9d56494dae0867b2cd477)

[Highly expressed in sib] (https://maayanlab.cloud/FishEnrichr/enrich?dataset=721cbeab348a420e735a57d50d3d4a84)