Information for 12-GGAGTTGGCAGG (Motif 13)

C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G
Reverse Opposite:
G T A C T A G C C G A T T A C G A T G C A G T C G T C A T G C A G A T C G C A T A T G C G T A C
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.709
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.51%
Number of Background Sequences with motif776.9
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets105.0 +/- 46.7bp
Average Position of motif in Background106.3 +/- 64.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGAGTTGGCAGG
--NNTTGGCANN
 C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGAGTTGGCAGG
--GGTTGGCAT-
 C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGAGTTGGCAGG
--VGCTGGCA--
 C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G
A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGAGTTGGCAGG
---CTTGGCAA-
 C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGAGTTGGCAGG
---NTTGGCANN
 C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGAGTTGGCAGG
GGTGYTGACAGS
 C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGAGTTGGCAGG
----TTGACAGC
 C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGAGTTGGCAGG
--ARNTGACA--
 C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGAGTTGGCAGG
-TACTTGGCAGA
 C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGAGTTGGCAGG-
---VBTGWCAGCB
 C A T G T A C G C G T A C T A G A C G T C A G T T C A G T A C G A T G C G C T A A C T G C A T G A C G T
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C