Information for 16-GTTGAAACTGGC (Motif 16)

A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C T G A G C T A C G T A C G T A G T C C T G A C G T A A G T C
p-value:1e-10
log p-value:-2.409e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.3 +/- 70.9bp
Average Position of motif in Background62.5 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTGAAACTGGC
TTTGAAACCG--
 A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGAAACTGGC---
AACCGGTTNNAACCGGTTTN
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C A C G T A C G T A C G T
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTGAAACTGGC
ACTGAAACCA--
 A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTTGAAACTGGC---
---CAAGATGGCGGC
 A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

GRHL2/MA1105.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTTGAAACTGGC-----
--NNAAACTGGTTTGNC
 A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T C A C T G A C T G A C T G A T A G C G C A T C A T G A T C G G C A T G A C T C G A T A C T G C A G T G A T C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTTGAAACTGGC-
---NHAACBGYYV
 A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PRDM1/MA0508.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTTGAAACTGGC
-GTGAAAGTGA-
 A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C
A C G T C T A G C G A T A C T G C G T A G C T A G T C A C T A G A G C T C T A G C G T A A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTGAAACTGGC
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTTGAAACTGGC-
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTTGAAACTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G C G A T A G C T A C T G C G T A C G T A C T G A A G T C A C G T A C T G A C T G G T A C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A