Information for 14-CCAGTTGSAG (Motif 17)

T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G
Reverse Opposite:
G A T C G C A T A T C G T A G C T G C A T C G A G T A C C G A T C T A G A T C G
p-value:1e-9
log p-value:-2.279e+01
Information Content per bp:1.562
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.87%
Number of Background Sequences with motif938.9
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets94.1 +/- 60.5bp
Average Position of motif in Background95.5 +/- 66.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTTGSAG
NNCAGTTGNN-
 A C G T T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T

ASCL1/MA1100.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTTGSAG-
NNCCAGCTGCTNN
 A C G T A C G T T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G A C G T
A T G C T A C G T A G C T A G C T G C A A T C G T A G C G C A T A T C G A G T C G A C T A T C G A T G C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCAGTTGSAG
NCAGCTGCTG
 T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCAGTTGSAG
GACAGCTGCAG
 A C G T T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTTGSAG
NNVCAGCTGB--
 A C G T A C G T T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCAGTTGSAG
AACAGCTGCAG
 A C G T T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCAGTTGSAG
NNVVCAGCTGBN-
 A C G T A C G T A C G T T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGTTGSAG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTTGSAG
DRVCAGCTGK--
 A C G T A C G T T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G
C A T G C T G A T G C A A G T C C G T A A C T G T G A C A C G T A C T G A C T G A C G T A C G T

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCAGTTGSAG
NAMCAGCTGK--
 A C G T A C G T T A G C G A T C G C T A C A T G A G C T A C G T A T C G T A G C C G T A C T A G
C T A G T C G A T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T A C G T