Information for 1-TGTTTACTTTGG (Motif 2)

C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G
Reverse Opposite:
A G T C G T A C G C T A T C G A C T G A T C A G G A C T G T C A G T C A C T G A A G T C G T C A
p-value:1e-39
log p-value:-9.108e+01
Information Content per bp:1.714
Number of Target Sequences with motif177.0
Percentage of Target Sequences with motif21.20%
Number of Background Sequences with motif3188.0
Percentage of Background Sequences with motif6.95%
Average Position of motif in Targets100.5 +/- 51.8bp
Average Position of motif in Background98.8 +/- 71.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--TGTTTACTTTGG--
NNTGTTTATTTTGGCA
 A C G T A C G T C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TGTTTACTTTGG
TGTTTACTTAGG
 C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGTTTACTTTGG
TGTTTACTTT--
 C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGTTTACTTTGG
TGTTTACTTT--
 C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----TGTTTACTTTGG
TCCATGTTTACTTTG-
 A C G T A C G T A C G T A C G T C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:6
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TGTTTACTTTGG
TGTTTAYTTAGC
 C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G
C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---TGTTTACTTTGG
BSNTGTTTACWYWGN
 A C G T A C G T A C G T C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TGTTTACTTTGG
TRTTTACTTW--
 C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGTTTACTTTGG
TGTTTATTT---
 C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACTTTGG
TTTGTTTACTTA--
 A C G T A C G T C A G T T C A G G A C T A C G T C A G T C T G A A G T C G A C T A G C T C G A T C A T G T C A G
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T