Information for 19-AGCTTTAGAG (Motif 20)

C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G
Reverse Opposite:
A T G C C G A T A G T C C G A T C T G A T C G A C T G A T A C G T A G C C G A T
p-value:1e-7
log p-value:-1.661e+01
Information Content per bp:1.830
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif201.1
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets114.8 +/- 61.9bp
Average Position of motif in Background96.7 +/- 66.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCTTTAGAG
CAAGCTT-----
 A C G T A C G T C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGCTTTAGAG---
TTGACCTTTTGACCTT
 A C G T A C G T A C G T C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCTTTAGAG----
TATCATTAGAACGCT
 A C G T C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G A C G T A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCTTTAGAG
CAGCC------
 A C G T C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCTTTAGAG---
--CTTGAGTGGCT
 C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGCTTTAGAG--
BCNGGTTCTAGANCN
 A C G T A C G T A C G T C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCTTTAGAG----
--GGTTAGAGACCT
 C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Rarb/MA0857.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGCTTTAGAG----
TGACCTTTTGACCTTT
 A C G T A C G T C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G A C G T A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGCTTTAGAG
AAACMATTAN--
 A C G T A C G T C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGCTTTAGAG--
--BTBRAGTGSN
 C G T A A T C G A T G C G A C T A G C T A G C T C G T A A C T G C G T A T A C G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C