Information for 14-WCCAATAC (Motif 24)

C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C G T A T C G A C T G C G A T
p-value:1e-4
log p-value:-9.669e+00
Information Content per bp:1.879
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.59%
Number of Background Sequences with motif742.6
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets96.9 +/- 46.1bp
Average Position of motif in Background102.5 +/- 65.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--WCCAATAC-------
CATACAATACGAAATAA
 A C G T A C G T C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:WCCAATAC-----
-SSAATCCACANN
 C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

NFYA/MA0060.3/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-WCCAATAC--
AACCAATCAGA
 A C G T C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C A C G T A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------WCCAATAC-
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-WCCAATAC-
AGCCAATCGG
 A C G T C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-WCCAATAC
RRTCAATA-
 A C G T C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:WCCAATAC---
TCCAATCCACA
 C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C A C G T A C G T A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----WCCAATAC
ACTAGCCAATCA
 A C G T A C G T A C G T A C G T C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---WCCAATAC-
AGATGCAATCCC
 A C G T A C G T A C G T C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WCCAATAC---
-CCAATAAAAC
 C G T A A G T C A T G C C G T A C G T A A C G T G T C A A G T C A C G T A C G T A C G T
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C