Information for 2-CTGTGGTCTG (Motif 3)

A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G
Reverse Opposite:
A T G C G C T A C T A G T C G A A G T C G A T C T G C A T A G C C T G A T C A G
p-value:1e-32
log p-value:-7.574e+01
Information Content per bp:1.636
Number of Target Sequences with motif271.0
Percentage of Target Sequences with motif32.46%
Number of Background Sequences with motif7161.9
Percentage of Background Sequences with motif15.62%
Average Position of motif in Targets100.9 +/- 59.9bp
Average Position of motif in Background99.9 +/- 69.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:CTGTGGTCTG
CTGTGGTTTN
 A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGTCTG
GTCTGTGGTTT-
 A C G T A C G T A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGTCTG
NNHTGTGGTTWN
 A C G T A C G T A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGTCTG
GCTGTGGTTT-
 A C G T A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGTCTG
NNTGTGGTTT-
 A C G T A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGTCTG
TTTGCGGTTT-
 A C G T A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGTGGTCTG
TTGCGGTTT-
 A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGTCTG-
CYWSTGGTCARA
 A C G T A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G A C G T
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGTCTG
CAGTGTGGTCGC
 A C G T A C G T A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTGTGGTCTG
TCACCTCTGGGCAG
 A C G T A C G T A C G T A C G T A G T C G A C T A T C G A C G T C T A G T C A G A G C T G A T C C G A T T A C G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G