Information for 5-GCCAGCTGGCCA (Motif 6)

T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
Reverse Opposite:
C G A T C A T G A C T G T A G C T G A C C T G A T A C G A G T C G A C T C A T G T A C G A T G C
p-value:1e-17
log p-value:-4.006e+01
Information Content per bp:1.702
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.66%
Number of Background Sequences with motif970.2
Percentage of Background Sequences with motif2.12%
Average Position of motif in Targets108.3 +/- 54.5bp
Average Position of motif in Background105.1 +/- 71.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCCAGCTGGCCA
VNAVCAGCTGGC--
 A C G T A C G T T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GCCAGCTGGCCA
-MCAGCTGBYH-
 T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GCCAGCTGGCCA
-VCAGCTGBNN-
 T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GCCAGCTGGCCA
NNVVCAGCTGBN--
 A C G T A C G T T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCCAGCTGGCCA
NAHCAGCTGD---
 A C G T T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GCCAGCTGGCCA
-MCAGCTGKTN-
 T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A G C T G A T C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GCCAGCTGGCCA
-CCAGCTGTTN-
 T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCCAGCTGGCCA
GCCATCTGTT--
 T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGCTGGCCA
CAGCAGCTGN---
 A C G T T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGCTGGCCA
NNGCAGCTGTC--
 A C G T T A C G A T G C G T A C C T G A T C A G A T G C G A C T A C T G A T C G T G A C G T A C G C T A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T