Information for 18-CAAAGGCGCCTT (Motif 15)

T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T
Reverse Opposite:
T G C A C G T A C T A G T C A G T G A C C A T G A T G C G A T C G A C T A G C T C A G T A C T G
p-value:1e-19
log p-value:-4.488e+01
Information Content per bp:1.598
Number of Target Sequences with motif173.0
Percentage of Target Sequences with motif4.72%
Number of Background Sequences with motif992.2
Percentage of Background Sequences with motif2.18%
Average Position of motif in Targets106.8 +/- 50.8bp
Average Position of motif in Background99.3 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGGCGCCTT
ACAAAGGNBCCT-
 A C G T T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAAAGGCGCCTT-
-CAAGACGCCTTA
 T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T A C G T
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGCGCCTT
AACAAAGG------
 A C G T A C G T T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAAAGGCGCCTT
AAAACAAAGAA-----
 A C G T A C G T A C G T A C G T T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGCGCCTT
RACAAWGG------
 A C G T A C G T T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGCGCCTT
ASATCAAAGG------
 A C G T A C G T A C G T A C G T T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGCGCCTT
AAAACAAAGG------
 A C G T A C G T A C G T A C G T T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAAAGGCGCCTT
ACATCAAAGG------
 A C G T A C G T A C G T A C G T T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAAAGGCGCCTT
ACWTCAAAGG------
 A C G T A C G T A C G T A C G T T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGCGCCTT
GGAACAAAGR------
 A C G T A C G T A C G T A C G T T G A C G T C A T C G A C T G A C T A G T A C G G T A C A C T G A G T C G A T C G C A T A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T