Information for 20-CGAGGCCT (Motif 17)

A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G C T A G A G T C A G T C A C G T A G T C A T C G
p-value:1e-13
log p-value:-3.173e+01
Information Content per bp:1.892
Number of Target Sequences with motif351.0
Percentage of Target Sequences with motif9.58%
Number of Background Sequences with motif2876.2
Percentage of Background Sequences with motif6.31%
Average Position of motif in Targets94.8 +/- 56.6bp
Average Position of motif in Background100.5 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CGAGGCCT
CNAGGCCT
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CGAGGCCT
CTAGGCCT
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----CGAGGCCT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGAGGCCT
HAWGRGGCCM
 A C G T A C G T A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGAGGCCT
NTCAAGGTCA
 A C G T A C G T A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:6
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CGAGGCCT
CTCCCTGGGAGGCCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGAGGCCT--
CAAGGHCANV
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGAGGCCT
NGAAGC--
 A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGAGGCCT
BTCAAGGTCA
 A C G T A C G T A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

PROX1/MA0794.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGAGGCCT--
CAAGACGCCTTA
 A C G T A C G T A T G C A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A