Information for 21-CTAATGAG (Motif 18)

A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G
Reverse Opposite:
G A T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G
p-value:1e-12
log p-value:-2.981e+01
Information Content per bp:1.911
Number of Target Sequences with motif169.0
Percentage of Target Sequences with motif4.61%
Number of Background Sequences with motif1138.5
Percentage of Background Sequences with motif2.50%
Average Position of motif in Targets101.0 +/- 55.7bp
Average Position of motif in Background98.0 +/- 65.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CTAATGAG--
NTAATGAGCT
 A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G A C G T A C G T
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

LXH9(Homeobox)/Hct116-LXH9.V5-ChIP-Seq(GSE116822)/Homer

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CTAATGAG
NGCTAATTAG
 A C G T A C G T A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G
A T G C T A C G A G T C G A C T T G C A C T G A G A C T A C G T C T G A T C A G

EMX1/MA0612.1/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CTAATGAG-
CCTAATTACC
 A C G T A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G A C G T
T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C

NOTO/MA0710.1/Jaspar

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CTAATGAG-
NNTAATTAGN
 A C G T A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G A C G T
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----CTAATGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C G T A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CTAATGAG-
NNTAATTANN
 A C G T A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G A C G T
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CTAATGAG-
NNTAATTANN
 A C G T A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G A C G T
A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

PDX1/MA0132.2/Jaspar

Match Rank:8
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CTAATGAG
CTAATTAN
 A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G
A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----CTAATGAG-----
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C G T A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

HOXA2/MA0900.1/Jaspar

Match Rank:10
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CTAATGAG-
GNTAATTANN
 A C G T A G T C C G A T C G T A C G T A A C G T A C T G C G T A C T A G A C G T
A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G