Information for 5-CTGTGGTYWS (Motif 3)

G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
Reverse Opposite:
A T G C G C A T C T A G C T G A T G A C A G T C C T G A A T G C C G T A C T A G
p-value:1e-74
log p-value:-1.717e+02
Information Content per bp:1.662
Number of Target Sequences with motif762.0
Percentage of Target Sequences with motif20.80%
Number of Background Sequences with motif4765.2
Percentage of Background Sequences with motif10.45%
Average Position of motif in Targets100.8 +/- 55.2bp
Average Position of motif in Background100.2 +/- 66.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGTYWS
NNHTGTGGTTWN
 A C G T A C G T G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:CTGTGGTYWS
CTGTGGTTTN
 G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGTYWS
GCTGTGGTTT-
 A C G T G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGTYWS
GTCTGTGGTTT-
 A C G T A C G T G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGTYWS
NNTGTGGTTT-
 A C G T G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGTYWS
TTTGCGGTTT-
 A C G T G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CTGTGGTYWS
TTGCGGTTT-
 G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTGTGGTYWS
--GTGGAT--
 G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGTYWS
CAGTGTGGTCGC
 A C G T A C G T G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGTYWS
GCTGTG-----
 A C G T G A T C C G A T A T C G G A C T C T A G A C T G G A C T G A T C C G T A T A C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T