Information for 12-GGCTGCCAGC (Motif 8)

C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C
Reverse Opposite:
C A T G G A T C C G A T C A T G T A C G T A G C G C T A T A C G T G A C G A T C
p-value:1e-27
log p-value:-6.264e+01
Information Content per bp:1.651
Number of Target Sequences with motif846.0
Percentage of Target Sequences with motif23.10%
Number of Background Sequences with motif7352.9
Percentage of Background Sequences with motif16.13%
Average Position of motif in Targets98.9 +/- 56.6bp
Average Position of motif in Background99.1 +/- 66.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:1
Score:0.80
Offset:3
Orientation:forward strand
Alignment:GGCTGCCAGC-
---TGCCAGCB
 C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C A C G T
A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGCTGCCAGC
VGCTGWCAVB
 C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GGCTGCCAGC
--TTGCCAAG
 C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGCCAGC---
TGGCAGNCTGCCAG
 A C G T C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C A C G T A C G T A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGCTGCCAGC-
--ATGCCAACC
 C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGCTGCCAGC-
CTGTCTGTCACCT
 A C G T A C G T C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGCCAGC-
TGTCTGDCACCT
 A C G T C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGCTGCCAGC---
-SCTGTCARCACC
 C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C A C G T A C G T A C G T
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGCTGCCAGC-
--CTGCCCGCA
 C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCTGCCAGC
-CGTGCCAAG
 C A T G A C T G A T G C C G A T A T C G A T G C G T A C G C T A C T A G G T A C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G