Information for 12-TGGAAAATCC (Motif 11)

G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C
Reverse Opposite:
C T A G C T A G C G T A C G A T C G A T C G A T C G A T T G A C T A G C C T G A
p-value:1e-27
log p-value:-6.246e+01
Information Content per bp:1.594
Number of Target Sequences with motif453.0
Percentage of Target Sequences with motif16.02%
Number of Background Sequences with motif4372.5
Percentage of Background Sequences with motif9.49%
Average Position of motif in Targets101.7 +/- 53.3bp
Average Position of motif in Background100.8 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC3/MA0625.1/Jaspar

Match Rank:1
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAAATCC
AATGGAAAAT--
 A C G T A C G T G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAAATCC
NNTGGAAANN--
 A C G T A C G T G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAAATCC
AATGGAAAAT--
 A C G T A C G T G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TGGAAAATCC
TGGAAAA---
 G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAAATCC
NATGGAAAAN--
 A C G T A C G T G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:TGGAAAATCC-
-GGAAATTCCC
 G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TGGAAAATCC-
-GGAAANCCCC
 G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TGGAAAATCC-
-GGAAATTCCC
 G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TGGAAAATCC-
-GGAAATCCCC
 G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGGAAAATCC--
GGGAAATCCCCN
 G A C T A T C G A C T G G C T A C G T A G C T A G C T A G C A T G A T C G A T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T