Information for 17-CTTGGCCG (Motif 15)

A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G
Reverse Opposite:
G A T C C A T G C T A G A T G C G A T C T G C A T C G A T C A G
p-value:1e-20
log p-value:-4.732e+01
Information Content per bp:1.606
Number of Target Sequences with motif785.0
Percentage of Target Sequences with motif27.76%
Number of Background Sequences with motif9374.2
Percentage of Background Sequences with motif20.35%
Average Position of motif in Targets98.4 +/- 57.1bp
Average Position of motif in Background100.0 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CTTGGCCG-
TACTTGGCAGA
 A C G T A C G T A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCG-
NTTGGCANN
 A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGCCG-
NNTTGGCANN
 A C G T A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCG
CTTGGCAA
 A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTTGGCCG
WDNCTGGGCA-
 A C G T A C G T A C G T A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCG
CTAGGCCT
 A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTTGGCCG
CCGATTGGCT-
 A C G T A C G T A C G T A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTGGCCG--
TGATTGGCTANN
 A C G T A C G T A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTGGCCG
NNACTTGCCTT
 A C G T A C G T A C G T A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTTGGCCG---
GGGGCTYGKCTGGGA
 A C G T A C G T A C G T A C G T A G T C A G C T A C G T C T A G T A C G G A T C G T A C C T A G A C G T A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A