Information for 21-GYCCTTGT (Motif 19)

A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A C T G A T C G C T A G A G T C
p-value:1e-11
log p-value:-2.564e+01
Information Content per bp:1.915
Number of Target Sequences with motif133.0
Percentage of Target Sequences with motif4.70%
Number of Background Sequences with motif1142.6
Percentage of Background Sequences with motif2.48%
Average Position of motif in Targets89.7 +/- 50.0bp
Average Position of motif in Background99.0 +/- 62.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---GYCCTTGT
BNTGDCCTTG-
 A C G T A C G T A C G T A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GYCCTTGT------
GAGCCCTTGTCCCTAA
 A C G T A C G T A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GYCCTTGT-
TGACCTTGAN
 A C G T A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GYCCTTGT-
TGACCTTGAV
 A C G T A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GYCCTTGT---
-CCWTTGTYYB
 A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------GYCCTTGT---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GYCCTTGT-
-CCTTTGTT
 A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GYCCTTGT
AGGVNCCTTTGT
 A C G T A C G T A C G T A C G T A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GYCCTTGT----
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GYCCTTGT--
GTGACCTTGRVN
 A C G T A C G T A C T G G A T C A T G C A G T C A C G T A C G T A C T G A C G T A C G T A C G T
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C