Information for 3-AGBCTGTAATTA (Motif 2)

C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A
Reverse Opposite:
C G A T C G T A C G T A A C G T C A G T C T G A G A T C C G T A C A T G T A C G A T G C G A C T
p-value:1e-102
log p-value:-2.357e+02
Information Content per bp:1.615
Number of Target Sequences with motif495.0
Percentage of Target Sequences with motif17.50%
Number of Background Sequences with motif2712.4
Percentage of Background Sequences with motif5.89%
Average Position of motif in Targets98.9 +/- 52.2bp
Average Position of motif in Background99.1 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:1
Score:0.85
Offset:3
Orientation:forward strand
Alignment:AGBCTGTAATTA-
---NDGTAATTAC
 C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A A C G T
A C G T A C G T A C G T T C G A C A G T A C T G A G C T C G T A C G T A A C G T A C G T C T G A T A G C

VAX1/MA0722.1/Jaspar

Match Rank:2
Score:0.85
Offset:5
Orientation:reverse strand
Alignment:AGBCTGTAATTA-
-----NTAATTAG
 C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G A C T G T C A G C T A C A G T C A G T C T G A T C A G

VAX2/MA0723.1/Jaspar

Match Rank:3
Score:0.85
Offset:5
Orientation:reverse strand
Alignment:AGBCTGTAATTA-
-----NTAATTAG
 C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G

PDX1/MA0132.2/Jaspar

Match Rank:4
Score:0.84
Offset:5
Orientation:forward strand
Alignment:AGBCTGTAATTA-
-----GTAATTAG
 C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G

ALX3/MA0634.1/Jaspar

Match Rank:5
Score:0.84
Offset:4
Orientation:forward strand
Alignment:AGBCTGTAATTA--
----TCTAATTAAA
 C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

HOXB2/MA0902.1/Jaspar

Match Rank:6
Score:0.83
Offset:4
Orientation:forward strand
Alignment:AGBCTGTAATTA--
----AGTAATTAAC
 C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C

EMX1/MA0612.1/Jaspar

Match Rank:7
Score:0.83
Offset:4
Orientation:reverse strand
Alignment:AGBCTGTAATTA--
----NNTAATTAGN
 C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G

VSX1/MA0725.1/Jaspar

Match Rank:8
Score:0.83
Offset:5
Orientation:reverse strand
Alignment:AGBCTGTAATTA-
-----NTAATTAG
 C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G

MEOX2/MA0706.1/Jaspar

Match Rank:9
Score:0.83
Offset:4
Orientation:forward strand
Alignment:AGBCTGTAATTA--
----AGTAATTAAC
 C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.83
Offset:5
Orientation:forward strand
Alignment:AGBCTGTAATTA-
-----GTAATTAA
 C T G A T A C G A T G C G T A C C G A T C T A G A G C T G T C A G T C A C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A