Information for 6-TGTGGTAA (Motif 3)

A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A
Reverse Opposite:
G C A T C G A T C T G A T G A C G T A C C G T A T A G C T C G A
p-value:1e-53
log p-value:-1.233e+02
Information Content per bp:1.625
Number of Target Sequences with motif732.0
Percentage of Target Sequences with motif25.88%
Number of Background Sequences with motif6766.4
Percentage of Background Sequences with motif14.69%
Average Position of motif in Targets99.7 +/- 56.1bp
Average Position of motif in Background99.2 +/- 64.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTAA-
NNHTGTGGTTWN
 A C G T A C G T A C G T A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTAA
GCTGTGGTTT
 A C G T A C G T A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTAA-
CTGTGGTTTN
 A C G T A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTAA
GTCTGTGGTTT
 A C G T A C G T A C G T A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTAA
NNTGTGGTTT
 A C G T A C G T A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTAA
TTTGCGGTTT
 A C G T A C G T A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTAA
TTGCGGTTT
 A C G T A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGTGGTAA
-GTGGAT-
 A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTAA-
CAGTGTGGTCGC
 A C G T A C G T A C G T A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTAA
NATGTTGCAA
 A C G T A C G T A G C T A T C G G C A T C A T G A C T G G A C T G C T A C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A