Information for 9-VCTGGCGCCA (Motif 7)

T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A
Reverse Opposite:
G C A T C T A G C T A G G T A C A C T G G A T C A G T C C G T A A T C G A C G T
p-value:1e-31
log p-value:-7.225e+01
Information Content per bp:1.566
Number of Target Sequences with motif361.0
Percentage of Target Sequences with motif12.77%
Number of Background Sequences with motif3050.1
Percentage of Background Sequences with motif6.62%
Average Position of motif in Targets103.9 +/- 54.6bp
Average Position of motif in Background102.6 +/- 63.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---VCTGGCGCCA----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---VCTGGCGCCA----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:VCTGGCGCCA--
TTTGGCGCCAAA
 T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--VCTGGCGCCA----
AAAATGGCGCCATTTT
 A C G T A C G T T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---VCTGGCGCCA-----
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:VCTGGCGCCA
-AGCGCGCC-
 T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--VCTGGCGCCA----
NNNGGGGCGCCCCCNN
 A C G T A C G T T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:VCTGGCGCCA
NTTGGCANN-
 T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---VCTGGCGCCA
GRTGMTRGAGCC-
 A C G T A C G T A C G T T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:VCTGGCGCCA
----GCTCCG
 T G C A T A G C G C A T T C A G C T A G T G A C C A T G G A T C A G T C C G T A
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G