Information for 11-CTATATAT (Motif 8)

A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T
Reverse Opposite:
C G T A C G A T C G T A C G A T C G T A A C G T C G T A A C T G
p-value:1e-30
log p-value:-6.993e+01
Information Content per bp:1.858
Number of Target Sequences with motif261.0
Percentage of Target Sequences with motif9.23%
Number of Background Sequences with motif1938.6
Percentage of Background Sequences with motif4.21%
Average Position of motif in Targets100.8 +/- 58.8bp
Average Position of motif in Background97.7 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2D/MA0773.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CTATATAT---
ACTATAAATAGA
 A C G T A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CTATATAT---
TCTAAAAATAGA
 A C G T A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CTATATAT---
GCTATAAATAGC
 A C G T A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTATATAT--
CCATATATGG
 A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CTATATAT-------
GTATAAAAGGCGGGG
 A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CTATATAT-------
GTATAAAAGGCGGGG
 A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTATATAT---
GCTATTTTTGGM
 A C G T A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTATATAT---
GCTATTTTTAGC
 A C G T A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTATATAT---
KCTATTTTTRGH
 A C G T A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CTATATAT------
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A G T C A C G T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T