Information for 1-TATAAGGATT (Motif 1)

A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A G T C A C G T A C G T C G T A A C G T C G T A
p-value:1e-4
log p-value:-1.106e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TATAAGGATT
NNATAAGGNN-
 A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TATAAGGATT---
---VRGGATTARN
 A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TATAAGGATT------
TGAACCGGATTAATGAA
 A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TATAAGGATT------
TGAACCGGATTAATGAA
 A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TATAAGGATT----
AAAAACGGATTATTG
 A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TATAAGGATT--
----NGGATTAA
 A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TATAAGGATT-------
NNAAGGGATTAACGANT
 A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TATAAGGATT-------
TGTAGGGATTAATTGTC
 A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TATAAGGATT-------
TGAAGGGATTAATCATC
 A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TATAAGGATT
GNCTATAAAAGG---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T