Information for 9-TTGGAGTTAGAA (Motif 10)

A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T C G T A C G T A A G T C A C G T A G T C A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.106e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets167.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAGTTAGAA---
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTGGAGTTAGAA----
-TATCATTAGAACGCT
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTGGAGTTAGAA-
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTGGAGTTAGAA
TTGCGGTTT---
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTGGAGTTAGAA
ATGGGGTGAT--
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAGTTAGAA
TTTGCGGTTT---
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTGGAGTTAGAA------
-NNGATCTAGAACCTNNN
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TTGGAGTTAGAA--
-----ATTTGAATT
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TTGGAGTTAGAA
AAGATCGGAANTNNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTGGAGTTAGAA
TGGCAGTTGG--
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A A C T G C G T A C G T A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T