Information for 12-GATCCCAGACTA (Motif 13)

A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C G T A G T C
p-value:1e-4
log p-value:-1.106e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GATCCCAGACTA
-ATGCCAGACN-
 A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GATCCCAGACTA
----BCAGACWA
 A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GATCCCAGACTA-----
--TCCCAGMCRAGCCCC
 A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ZNF410/MA0752.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GATCCCAGACTA---
TCCATCCCATAATACTC
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GATCCCAGACTA
----CCAGACAG
 A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GATCCCAGACTA--
----CCAGACRSVB
 A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GATCCCAGACTA----
CAAATCCAGACATCACA
 A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GATCCCAGACTA
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GATCCCAGACTA
-TGCCCAGNHW-
 A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GATCCCAGACTA
---TCTAGACA-
 A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T