Information for 21-CACTATTTCAAC (Motif 21)

A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.106e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACTATTTCAAC
--CTATTTTTGG
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CACTATTTCAAC-
-KCTATTTTTRGH
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACTATTTCAAC-
CTAATATTGCTAAA
 A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACTATTTCAAC-
CTAATATTGCTAAA
 A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CACTATTTCAAC-
----ATTTGAATT
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CACTATTTCAAC--
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

PB0177.1_Sox7_2/Jaspar

Match Rank:7
Score:0.56
Offset:-10
Orientation:reverse strand
Alignment:----------CACTATTTCAAC
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACTATTTCAAC-
-GCTATTTTTGGM
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CACTATTTCAAC---
-----TTGCAACATN
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CACTATTTCAAC---
-----TTTGAAACCG
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G