Information for 24-ATGGCAGTATAA (Motif 24)

C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C T G A G T C A G T C C G T A A C G T
p-value:1e-4
log p-value:-1.106e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCAGTATAA
TAATGGCGGNC---
 A C G T A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCAGTATAA
VGCTGGCA------
 A C G T A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATGGCAGTATAA-----
-TAAGATTATAATACGG
 C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCAGTATAA--
NNNTGGCAGTTGGTNN
 A C G T A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCAGTATAA
CTTGGCAA-----
 A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ATGGCAGTATAA---------
------GTATAAAAGGCGGGG
 C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATGGCAGTATAA---------
------GTATAAAAGGCGGGG
 C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCAGTATAA
NTTGGCANN----
 A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCAGTATAA
TNNGGGCAG-----
 A C G T A C G T C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATGGCAGTATAA-----
-TATAATTATAATATTC
 C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C