Information for 12-TTAGACACCA (Motif 30)

A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A C G T A
p-value:1e-3
log p-value:-8.064e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets187.0 +/- 0.0bp
Average Position of motif in Background107.0 +/- 67.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTAGACACCA
GGTTAGAGACCT
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTAGACACCA----
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Smad4/MA1153.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTAGACACCA
TCTAGACA---
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTAGACACCA
BCAGACWA--
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTAGACACCA-
TTTCACACCTN
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTAGACACCA---
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTAGACACCA----
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTAGACACCA
TTTCACACCT
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A
A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TTAGACACCA--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTAGACACCA
--TGACACCT
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T