Information for 24-TGTTACTGGC (Motif 35)

A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C T G A C G T C G T A C G T A A G T C C G T A
p-value:1e-3
log p-value:-7.299e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif44.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background130.4 +/- 95.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTTACTGGC
CTGTTCCTGG-
 A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTTACTGGC-
-GTTAATGGCC
 A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C A C G T
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTTACTGGC-----
CAATCACTGGCAGAAT
 A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGTTACTGGC----
--TGATTGGCTANN
 A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTACTGGC
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGTTACTGGC
NTTTTATTGG-
 A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGTTACTGGC---
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PH0063.1_Hoxb8/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTTACTGGC----
TTTATTAATTGCNNGN
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTTACTGGC-
CTGTTGCTAGGS
 A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGTTACTGGC--
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T