Information for 4-ACTCTTTGTTGG (Motif 5)

C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A C T G A C G T
p-value:1e-4
log p-value:-1.106e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACTCTTTGTTGG
-NNCTTTGTTNN
 C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G
A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACTCTTTGTTGG---
TNNTCCTTTGTTCTNNT
 A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACTCTTTGTTGG
--CCWTTGTYYB
 C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACTCTTTGTTGG
--YCTTTGTTCC
 C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACTCTTTGTTGG---
NNNTCCTTTGTTCTNNN
 A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ACTCTTTGTTGG
--CCWTTGTY--
 C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACTCTTTGTTGG
AGGVNCCTTTGT---
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTCTTTGTTGG
--CCTTTGTT--
 C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ACTCTTTGTTGG
----ATTGTT--
 C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTCTTTGTTGG
--CCTTTGTTTT
 C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T