Information for 8-AGGCCTTCATTC (Motif 12)

C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTTCATTC
CNAGGCCT------
 A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTTCATTC
CTAGGCCT------
 A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF24/MA1124.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGGCCTTCATTC----
---CATTCATTCATTC
 C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C T C G A G A C T A G C T G A T C T C G A A G C T A G C T G A T C T C G A G A C T A G C T G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGCCTTCATTC-----
-NNCATTCATTCATNNN
 C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AGGCCTTCATTC
GGGGCCGAGGCCTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGGCCTTCATTC--
----CYRCATTCCA
 C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T G A C A G T C C T G A T G A C C G T A A C G T A C G T A G T C A G T C C G T A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGGCCTTCATTC--
----TTTCATTRCC
 C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGGCCTTCATTC-
-GGCCATAAATCA
 C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGCCTTCATTC
TGACCTTGAN--
 C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGGCCTTCATTC-
-GSCTGTCACTCA
 C G T A A C T G A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A