Information for 10-CTGGCTGAACAA (Motif 13)

A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background98.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGGCTGAACAA------
-NNNNNGAACAATTGANN
 A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGGCTGAACAA------
-TCACGGAACAATAGGTG
 A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CTGGCTGAACAA-
-------AACAAT
 A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

PB0070.1_Sox30_1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGGCTGAACAA-------
---AATGAACAATGGAATT
 A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTGGCTGAACAA----
------GAACAATGGN
 A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTGGCTGAACAA-
----GTAAACAAT
 A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGGCTGAACAA-------
--TAGTGAACAATAGATTT
 A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTGGCTGAACAA---
-----RNAACAATGG
 A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTGGCTGAACAA---
-----GGAACAAAGR
 A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTGGCTGAACAA-
------NAACAAT
 A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T