Information for 14-TCCAGACATAGC (Motif 16)

A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G C G T A
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TCCAGACATAGC-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TCCAGACATAGC
TCTAGACA----
 A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCCAGACATAGC
KCCAAAAATAGC
 A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCCAGACATAGC
-CCAGACAG---
 A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCCAGACATAGC
-CCAGACRSVB-
 A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCCAGACATAGC
DCYAAAAATAGM
 A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGACATAGC
ATGCCAGACN----
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCAGACATAGC
-CCATATATGG-
 A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCCAGACATAGC-
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCAGACATAGC
-BCAGACWA---
 A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T