Information for 16-CATGGCAGTATA (Motif 18)

A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A G T C A C G T A C T G A G T C A G T C C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATGGCAGTATA
TACTTGGCAGA---
 A C G T A C G T A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATGGCAGTATA
CTTGGCAA----
 A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATGGCAGTATA---
NNNTGGCAGTTGGTNN
 A C G T A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CATGGCAGTATA
TAATGGCGGNC--
 A C G T A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CATGGCAGTATA
VGCTGGCA-----
 A C G T A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATGGCAGTATA
NTTGGCANN---
 A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CATGGCAGTATA
NNTTGGCANN---
 A C G T A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CATGGCAGTATA
--TGGCAGTTGG
 A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A
A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CATGGCAGTATA
TNNGGGCAG----
 A C G T A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CATGGCAGTATA---
TCCATCCCATAATACTC
 A C G T A C G T A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C