Information for 19-CTTGAGGCCTCA (Motif 20)

A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets152.0 +/- 0.0bp
Average Position of motif in Background166.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTTGAGGCCTCA
--CNAGGCCT--
 A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTGAGGCCTCA
--CTAGGCCT--
 A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTTGAGGCCTCA--
----KGGCCYCWTD
 A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTTGAGGCCTCA-----
---CAGGCCNNGGCCNN
 A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAGGCCTCA
NGCCTGAGGCN---
 A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTTGAGGCCTCA
ATGCCCTGAGGC----
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAGGCCTCA
NGCCTNAGGCN---
 A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTTGAGGCCTCA---
-TTCACGCATGAGTT
 A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTTGAGGCCTCA
WTGSCCTSAGGS----
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAGGCCTCA
TGCCTGAGGCN---
 A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T